10000 Celsr1 Status: Cancelled
Gene | Celsr1 |
Chromosome | 15 |
Deletion Start | 86,033,767 |
Deletion End | 86,030,164 |
Deletion Size | 3,604 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 15
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 86,033,425 | 86,033,445 | TACTAAGGGCACGCGCCTATG |
TUP | 86,033,341 | 86,033,358 | TCCGCTCAGTTCCTGGAC |
TUR | 86,033,319 | 86,033,337 | GGGAAGCAGAGCGCATCTC |
TDF | 86,030,876 | 86,030,894 | GCCCACGTCTGGTGTGATC |
TDP | 86,030,845 | 86,030,868 | CATTCTCTCTGTCCAGCCGGCGCT |
TDR | 86,030,817 | 86,030,837 | GCGAGAGCCCAAAGGTTGTAC |
PCR Primers
Primer | Sequence |
SU | TGCTGCAGGTTGATGCGCG |
SD | TGAAACAGCCCAGGCTTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 405 bp | - | + | + |
TUF | TUR | 127 bp | + | + | - |
TDF | TDR | 78 bp | + | + | - |
NeoFwd | SD | 322 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |