10002   Slitrk3     Status: Germline transmission achieved

GeneSlitrk3
Chromosome3
Deletion Start73,051,434
Deletion End73,048,401
Deletion Size3,034
Genome Build38
MGI IDMGI:2679447
NCBI Gene ID386750
BAC ID228F17
BAC LibraryRPCI 23
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 3

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF73,049,72873,049,746TTGGGACTGCACTTGCGAC
TUP73,049,69773,049,723TCCCCTTTAAGCAGTGGATCGAAACCA
TUR73,049,67573,049,695CCTACCACGCTGACTGAGCTG
TDF73,049,09073,049,110AGACCGTGGAGGTCCTGGTAC
TDP73,049,06473,049,088CAACCAACAGGAATGGCTGAGGTGC
TDR73,049,04273,049,062GCAAACTGCTCACTTCCCAAG

PCR Primers

PrimerSequence
SUGTTGCCTCATTTGGAGTATCG
SDGGCACAGTCAAAGTCTCGAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev277 bp-++
TUFTUR72 bp++-
TDFTDR69 bp++-
NeoFwdSD311 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10002G-G12VGB6C57BL/6NTac
10002H-F9VGB6C57BL/6NTac