10020 Ch25h Status: Germline transmission achieved
| Gene | Ch25h |
| Chromosome | 19 |
| Deletion Start | 34,549,613 |
| Deletion End | 34,548,644 |
| Deletion Size | 970 |
| Genome Build | 37 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 34,549,240 | 34,549,260 | TGAGCTCGTCCAGCTCCTAAG |
| TUP | 34,549,212 | 34,549,236 | CGTCCTGATCTGCCTGCTGCTCTTC |
| TUR | 34,549,187 | 34,549,205 | GGTGCCACGCGAAGATCTC |
| TDF | 34,549,095 | 34,549,113 | GCTGGCGACCCAATACATG |
| TDP | 34,549,068 | 34,549,092 | CTTCTGGGAGCTGCTTTCGCTGACC |
| TDR | 34,549,037 | 34,549,055 | GAAGCACCGCGACGTTCAG |
PCR Primers
| Primer | Sequence |
| SU | GTGTCATTAGTACATCAGCTG |
| SD | GTCACTGCCCAGCAGGAAC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TCATTCTCAGTATTGTTTTGCC |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | 389 bp | - | + | + |
| TUF | TUR | 54 bp | + | + | - |
| TDF | TDR | 59 bp | + | + | - |
| NeoFwd | SD | 372 bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 10020A-A4 | VGB6 | C57BL/6NTac | |
| 10020A-A7 | VGB6 | C57BL/6NTac | |
| 10020A-A9 | VGB6 | C57BL/6NTac | |
| 10020A-A11 | VGB6 | C57BL/6NTac | |
| 10020A-B2 | VGB6 | C57BL/6NTac | |
| 10020A-B5 | VGB6 | C57BL/6NTac | |
