Gene | Adig |
Chromosome | 2 |
Deletion Start | 158,502,726 |
Deletion End | 158,505,907 |
Deletion Size | 3,182 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 158,502,817 | 158,502,837 | GGCTTTGCTGCTGTTCTTGAC |
TUP | 158,502,865 | 158,502,890 | ATCCAGCCTGAACCAGCTCACCTTGA |
TUR | 158,502,892 | 158,502,912 | CCTGCCCAGCTCCAAAATTAG |
TDF | 158,505,683 | 158,505,703 | GGTCTCATACAGGGCCACATG |
TDP | 158,505,709 | 158,505,733 | CAGGCTTGGCACATGTCTCCTCTGG |
TDR | 158,505,744 | 158,505,764 | GGGTGGGAACAGCCTGTAGTG |
PCR Primers
Primer | Sequence |
SU | TGACTCCTGGGTCAGGCCAGC |
SD | ATGTTCCAAAAACCCAGATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 375 bp | - | + | + |
TUF | TUR | 96 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | 347 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10117A-B1 | VGB6 | C57BL/6NTac | |
10117A-B5 | VGB6 | C57BL/6NTac | |
10117A-E3 | VGB6 | C57BL/6NTac | |