Gene | Il19 |
Chromosome | 1 |
Deletion Start | 130,939,238 |
Deletion End | 130,933,036 |
Deletion Size | 6,203 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 1
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 130,938,510 | 130,938,529 | TCAGTGGAATCAGGCTGGTG |
TUP | 130,938,481 | 130,938,505 | AACACGCTTGCTCACTGTCCCTGGA |
TUR | 130,938,460 | 130,938,479 | TCTGCCTGTCCTTTGCATCC |
TDF | 130,933,797 | 130,933,816 | GTGGCCCTATCCCAGAATCC |
TDP | 130,933,763 | 130,933,793 | CCACCTACAAGATGTCCCACCTCCTATTTCC |
TDR | 130,933,742 | 130,933,761 | TGAGGGCCTATCGCTTAGGC |
PCR Primers
Primer | Sequence |
SU | GACACATGTGTAGGTGTCAC |
SD | TGAGATCTCTCAACAGCCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 362 bp | - | + | + |
TUF | TUR | 70 bp | + | + | - |
TDF | TDR | 75 bp | + | + | - |
NeoFwd | SD | 335 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10119C-C2 | VGB6 | C57BL/6NTac | |
10119D-G12 | VGB6 | C57BL/6NTac | |
10119F-A1 | VGB6 | C57BL/6NTac | |
10119H-H8 | VGB6 | C57BL/6NTac | |