Gene | Tmem174 |
Chromosome | 13 |
Deletion Start | 98,637,317 |
Deletion End | 98,636,387 |
Deletion Size | 931 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 98,637,008 | 98,637,029 | TGCCAGTTGTGCTCAGATAACG |
TUP | 98,636,966 | 98,636,990 | ACTGTCCTCCGGAAGTCTGGTCCGA |
TUR | 98,636,941 | 98,636,961 | TGATTGATGCCAGTGAAAACG |
TDF | 98,636,882 | 98,636,902 | TCCCTCCTCCTTACGGTTCTC |
TDP | 98,636,851 | 98,636,875 | CCCTGGGAATGAACGCCACCTACCT |
TDR | 98,636,824 | 98,636,844 | AGACCGCAAGGATTCATCATG |
PCR Primers
Primer | Sequence |
SU | GCAGATTGGTACTGTTCCTC |
SD | TCACTCTATCACAGAGCGAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 328 bp | - | + | + |
TUF | TUR | 89 bp | + | + | - |
TDF | TDR | 79 bp | + | + | - |
NeoFwd | SD | 330 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10136A-B8 | VGB6 | C57BL/6NTac | |
10136A-G1 | VGB6 | C57BL/6NTac | |
10136A-F11 | VGB6 | C57BL/6NTac | |
10136A-F4 | VGB6 | C57BL/6NTac | |
10136A-E5 | VGB6 | C57BL/6NTac | |
10136A-B7 | VGB6 | C57BL/6NTac | |