Gene | C1ql3 |
Chromosome | 2 |
Deletion Start | 13,010,844 |
Deletion End | 13,004,246 |
Deletion Size | 6,599 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 13,010,776 | 13,010,795 | CGTCGGCTCACTACGAGATG |
TUP | 13,010,750 | 13,010,769 | ACCTGCCGCATGGTCTGCGA |
TUR | 13,010,679 | 13,010,697 | TGGGCAGGGACTGCATAAG |
TDF | 13,004,568 | 13,004,596 | GAAGTTGTTATGGAAATTCCTTCTAAACC |
TDP | 13,004,539 | 13,004,565 | TGGGACCAACAGCAACATCAGTGTGCT |
TDR | 13,004,514 | 13,004,537 | GACTTGCAGCCATAGCATACAATG |
PCR Primers
Primer | Sequence |
SU | CTCGGGACTTCAGTTCAAGT |
SD | AGGACACCAAAGTATCATAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 383 bp | - | + | + |
TUF | TUR | 117 bp | + | + | - |
TDF | TDR | 83 bp | + | + | - |
NeoFwd | SD | 425 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10163A-D1 | VGB6 | C57BL/6NTac | |