Gene | 1700029I15Rik |
Chromosome | 2 |
Deletion Start | 92,382,932 |
Deletion End | 92,383,586 |
Deletion Size | 655 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 92,383,084 | 92,383,105 | TGGAAGAGGCTGACCATTATCC |
TUP | 92,383,120 | 92,383,147 | TCATGAAGTCTTCACCCTGGACTGTCCC |
TUR | 92,383,149 | 92,383,169 | GGCCATTGCCACTTCTTTGTG |
TDF | 92,383,156 | 92,383,175 | AAGTGGCAATGGCCTTTTGG |
TDP | 92,383,177 | 92,383,204 | TTAGGGCTCAGCACAGCAATATTTCCCA |
TDR | 92,383,219 | 92,383,240 | GCTGAAAATTCCTCCGGAACAG |
PCR Primers
Primer | Sequence |
SU | GTAGTCTAGAGTGATGGACAG |
SD | AGACCCTGTTCTCATCTGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 333 bp | - | + | + |
TUF | TUR | 86 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | 372 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10173A-G3 | VGB6 | C57BL/6NTac | |
10173A-G5 | VGB6 | C57BL/6NTac | |
10173B-A2 | VGB6 | C57BL/6NTac | |
10173D-B6 | VGB6 | C57BL/6NTac | |
10173D-B8 | VGB6 | C57BL/6NTac | |
10173D-B11 | VGB6 | C57BL/6NTac | |
10173D-C8 | VGB6 | C57BL/6NTac | |
10173D-E2 | VGB6 | C57BL/6NTac | |
10173D-F6 | VGB6 | C57BL/6NTac | |