10177   Prg3     Status: ES cell colonies screened / QC positives

GenePrg3
Chromosome2
Deletion Start84,988,715
Deletion End84,993,766
Deletion Size5,052
Genome Build38
MGI IDMGI:1858200
NCBI Gene ID53856
BAC ID37C15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF84,989,38384,989,404GAGGAGGCAATGGAGTCAGATC
TUP84,989,42584,989,450TCTGCTTGCCCCAAGGAAGAGGACAC
TUR84,989,45384,989,474CCAGGAGTTCCCTGAAAATGAG
TDF84,993,56884,993,590GCAGGTTATTGCCACAATGTTTG
TDP84,993,59784,993,625CCTTCCTTGGCTATCATCAGCTTCAGAGG
TDR84,993,63584,993,656CACCCAACCCTTGTCAGATACC

PCR Primers

PrimerSequence
SUGAGGCAGCAGTAGCCCTCCC
SDCTTTGTCACTGCTCCCCAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev248 bp-++
TUFTUR92 bp++-
TDFTDR89 bp++-
NeoFwdSD323 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10177A-E7VGB6C57BL/6NTac
10177A-B11VGB6C57BL/6NTac
10177A-G10VGB6C57BL/6NTac