Gene | Cited4 |
Chromosome | 4 |
Deletion Start | 120,666,786 |
Deletion End | 120,667,351 |
Deletion Size | 566 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 120,666,971 | 120,666,989 | CTGGCATACGGCTCCTTCG |
TUP | 120,667,001 | 120,667,024 | TCTTTCCAGCCCTTCCCCGTCTCG |
TUR | 120,667,040 | 120,667,058 | ACTGCAGGTGCGTGCTACC |
TDF | 120,667,197 | 120,667,216 | CCGAGCTCATCGACGAAGAG |
TDP | 120,667,272 | 120,667,296 | AGCTCTTCCTCGGCCAGAGCGAGTT |
TDR | 120,667,298 | 120,667,318 | CCCCAGGTCTGAGAAGCAATC |
PCR Primers
Primer | Sequence |
SU | TTGCGGCCTGCAACTACTGC |
SD | ATCTGGCAGGAGGCAGAGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 310 bp | - | + | + |
TUF | TUR | 88 bp | + | + | - |
TDF | TDR | 122 bp | + | + | - |
NeoFwd | SD | 229 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10235B-G11 | VGB6 | C57BL/6NTac | |
10235C-A3 | VGB6 | C57BL/6NTac | |
10235C-B5 | VGB6 | C57BL/6NTac | |
10235C-C2 | VGB6 | C57BL/6NTac | |
10235C-E1 | VGB6 | C57BL/6NTac | |
10235C-G4 | VGB6 | C57BL/6NTac | |