10332   Efhd2     Status: ES cell colonies screened / QC positives

GeneEfhd2
Chromosome4
Deletion Start141,874,864
Deletion End141,859,726
Deletion Size15,139
Genome Build38
MGI IDMGI:106504
NCBI Gene ID27984
BAC ID439I17
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF141,874,228141,874,247TACCGACCTCCTTCCCACTG
TUP141,874,200141,874,225AATGTTACTGCACCCACCACCCTACA
TUR141,874,166141,874,185ACCGGCCCTTTCTCCCTTTC
TDF141,860,563141,860,582GCGTTAAGGGTGCCAAGAAC
TDP141,860,538141,860,561TCTTCGAGGCCAAGGTGAGAAGCC
TDR141,860,492141,860,513GTCCTGTCTTAGCTGTGTCGTC

PCR Primers

PrimerSequence
SUGGAACGATGATGAGGAGCTG
SDCATCACAGCCGCATGAACC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev354 bp-++
TUFTUR82 bp++-
TDFTDR91 bp++-
NeoFwdSD295 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10332A-C6VGB6C57BL/6NTac
10332A-D1VGB6C57BL/6NTac
10332B-D10VGB6C57BL/6NTac