Gene | Slc7a13 |
Chromosome | 4 |
Deletion Start | 19,818,785 |
Deletion End | 19,841,591 |
Deletion Size | 22,807 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 19,819,308 | 19,819,326 | GGTGGGCATACTCGGTGTC |
TUP | 19,819,327 | 19,819,351 | ATTTCCCTCAGCGGCCTGTTCTTGC |
TUR | 19,819,387 | 19,819,407 | CTCGGCATCAAACGCATTCTG |
TDF | 19,841,365 | 19,841,383 | CGTTGGGCATCACCCTGAG |
TDP | 19,841,390 | 19,841,416 | TTTGATCCCGCTTGTCAAGTCTCCAAA |
TDR | 19,841,439 | 19,841,459 | CAGCCCACTGAGAAGGAAGAG |
PCR Primers
Primer | Sequence |
SU | CATTTCCAAACTCTGGTTCC |
SD | AATCCAGTAGAGGATATTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 377 bp | - | + | + |
TUF | TUR | 100 bp | + | + | - |
TDF | TDR | 95 bp | + | + | - |
NeoFwd | SD | 363 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10337A-H4 | VGB6 | C57BL/6NTac | |
10337A-H6 | VGB6 | C57BL/6NTac | |
10337A-D1 | VGB6 | C57BL/6NTac | |