Gene | 1810049H13Rik |
Chromosome | 11 |
Deletion Start | 120,458,016 |
Deletion End | 120,456,732 |
Deletion Size | 1,285 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 120,457,523 | 120,457,544 | CTGGCTATCCGATCTGGACTTG |
TUP | 120,457,494 | 120,457,521 | TCCTCCTGCGAACTTTGAGAGTGAATGC |
TUR | 120,457,472 | 120,457,490 | TCGGCTCAATGCCTAACAC |
TDF | 120,456,953 | 120,456,971 | GCTGCCACCTGAGCTTGAG |
TDP | 120,456,927 | 120,456,950 | TCCCACCAACTGCTGCATGAGTGG |
TDR | 120,456,884 | 120,456,904 | CAGCAGAGCTTCGGCATAATC |
PCR Primers
Primer | Sequence |
SU | TGTCCCGAGCCTCTAAGAC |
SD | GGAAAGCTGTAGCTGTTGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 307 bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | 328 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10420B-C5 | VGB6 | C57BL/6NTac | |
10420B-C8 | VGB6 | C57BL/6NTac | |
10420B-D3 | VGB6 | C57BL/6NTac | |
10420B-E12 | VGB6 | C57BL/6NTac | |
10420B-F3 | VGB6 | C57BL/6NTac | |
10420B-H9 | VGB6 | C57BL/6NTac | |
10420C-B8 | VGB6 | C57BL/6NTac | |