10517   Gsdma2     Status: ES cell colonies screened / QC positives

GeneGsdma2
Chromosome11
Deletion Start98,666,043
Deletion End98,657,988
Deletion Size8,056
Genome Build38
MGI IDMGI:1921490
NCBI Gene ID76758
BAC ID452G22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF98,649,45898,649,479TTCCTTACCACAGATCCAACAC
TUP98,649,50698,649,534ATGCTGGATGTCAGAGTAGAGGGAGATGT
TUR98,649,54998,649,571CACAGTCCCCTTTACCTTCATCA
TDF98,657,78298,657,800AGCCTTCCCGGCCTTACTG
TDP98,657,80198,657,828TGCTCTGTCTGAAACACTCCAAGATGGT
TDR98,657,85098,657,870ACTGCCTCTGCCTCCTGACTG

PCR Primers

PrimerSequence
SUAGGGGAAGGCTGGCATCTTG
SDGGAGTTGCTAAAGAGCTGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev17350 bp-++
TUFTUR114 bp++-
TDFTDR89 bp++-
NeoFwdSD386 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10517A-B3VGB6C57BL/6NTac
10517A-C7VGB6C57BL/6NTac
10517A-G2VGB6C57BL/6NTac
10517B-D9VGB6C57BL/6NTac
10517B-E11VGB6C57BL/6NTac