Gene | Fstl3 |
Chromosome | 10 |
Deletion Start | 79,777,304 |
Deletion End | 79,781,475 |
Deletion Size | 4,172 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 79,777,688 | 79,777,708 | TGTAGGCCCTAGAGAGACATC |
TUP | 79,777,710 | 79,777,731 | CTGGGTGGCTGGCCCTGCTAAT |
TUR | 79,777,736 | 79,777,756 | TCCTGAAACCCTCTGCCTAAG |
TDF | 79,781,067 | 79,781,086 | GACTCACAGGGAGGAGACAC |
TDP | 79,781,087 | 79,781,112 | CATCCTGCACCTGACCCACCCTTTCT |
TDR | 79,781,125 | 79,781,143 | CACTACCTGAGCGCAAGAC |
PCR Primers
Primer | Sequence |
SU | CTGGACACCTGGAGGTGTCC |
SD | TCTCCATGCAGCTGCCATCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 416 bp | - | + | + |
TUF | TUR | 69 bp | + | + | - |
TDF | TDR | 77 bp | + | + | - |
NeoFwd | SD | 357 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10598A-A1 | VGB6 | C57BL/6NTac | |
10598A-B5 | VGB6 | C57BL/6NTac | |
10598A-B6 | VGB6 | C57BL/6NTac | |
10598A-H2 | VGB6 | C57BL/6NTac | |
10598A-D11 | VGB6 | C57BL/6NTac | |
10598A-G12 | VGB6 | C57BL/6NTac | |