10623   Rnf43     Status: ES cell colonies screened / QC positives

GeneRnf43
Chromosome11
Deletion Start87,727,139
Deletion End87,734,329
Deletion Size7,191
Genome Build38
MGI IDMGI:2442609
NCBI Gene ID207742
BAC ID240H13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF87,727,26687,727,286TGGAGGAAGGTTGGGTTCTTG
TUP87,727,28787,727,312AGCTGGTAGCAGAAGTCAAACAGCCC
TUR87,727,38287,727,402TCAGCTTCGCAGCATCACTAC
TDF87,733,50087,733,521CCACAGGCAGGAGAAACCTAAC
TDP87,733,52387,733,545TGCTGTGGCCTTCAGTGCTCCAG
TDR87,733,57587,733,595CAAAGCAGAGGGCAGAGGAAG

PCR Primers

PrimerSequence
SUCCAGTGAACCCTGGGTGAG
SDCTTGTGTGAGCTTGAAGCTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev373 bp-++
TUFTUR137 bp++-
TDFTDR96 bp++-
NeoFwdSD373 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10623A-H3VGB6C57BL/6NTac
10623A-C11VGB6C57BL/6NTac
10623A-C2VGB6C57BL/6NTac
10623A-H2VGB6C57BL/6NTac
10623A-D3VGB6C57BL/6NTac
10623A-H7VGB6C57BL/6NTac