Gene | Creb3 |
Chromosome | 4 |
Deletion Start | 43,562,795 |
Deletion End | 43,567,014 |
Deletion Size | 4,220 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 43,562,896 | 43,562,914 | TTTGTGGGCTGCGACTGAG |
TUP | 43,562,915 | 43,562,934 | CCGGACGTGAAGGCTCCGCT |
TUR | 43,562,938 | 43,562,958 | TCGGAAGGTGACAGCTCTAAG |
TDF | 43,566,021 | 43,566,043 | CACAGCATGAGTGGAGAGGGTAG |
TDP | 43,566,044 | 43,566,069 | CTAAGACAGGAGGCCTTCATCGTGCC |
TDR | 43,566,096 | 43,566,117 | AAGAGACGAGAGGAGACGGTAG |
PCR Primers
Primer | Sequence |
SU | AGGAGCCACTTCCGAGTTG |
SD | ACAAGGCACGGGACTAAGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 361 bp | - | + | + |
TUF | TUR | 63 bp | + | + | - |
TDF | TDR | 97 bp | + | + | - |
NeoFwd | SD | 330 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10650B-C5 | VGB6 | C57BL/6NTac | |
10650B-B1 | VGB6 | C57BL/6NTac | |