10716   Lrrn3     Status: ES cell colonies screened / QC positives

GeneLrrn3
Chromosome12
Deletion Start41,454,313
Deletion End41,452,190
Deletion Size2,124
Genome Build38
MGI IDMGI:106036
NCBI Gene ID16981
BAC ID55K13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF41,453,68341,453,705GGACATGAACTTTCAGCCTCTTG
TUP41,453,65841,453,682TCAAGCTTCGCAGCCTGGTTATAGC
TUR41,453,62641,453,647CGTCGTCTGGTATTTCCGTGAG
TDF41,453,08741,453,108AGGCCAGAATGTTCGGCAAGTG
TDP41,453,05541,453,082TCAGGGATATGATGGAAATTTGCCTCCC
TDR41,453,02141,453,043CAGGTCAGAAGGAAAGCTCTCAG

PCR Primers

PrimerSequence
SUATTGCTCCATATCCTGTGAC
SDAAATGTTCACGTTTAACTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev422 bp-++
TUFTUR80 bp++-
TDFTDR88 bp++-
NeoFwdSD364 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
10716E-F9VGB6C57BL/6NTac
10716E-E1VGB6C57BL/6NTac
10716D-H8VGB6C57BL/6NTac