Gene | Taar6 |
Chromosome | 10 |
Deletion Start | 23,985,643 |
Deletion End | 23,984,609 |
Deletion Size | 1,035 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 23,985,258 | 23,985,279 | TGAGCTTCATCTCCATCGACAG |
TUP | 23,985,233 | 23,985,255 | ACATCGCTGTCACGGACCCTCTG |
TUR | 23,985,211 | 23,985,232 | CCGTGAACTTGGTGGGATAGAC |
TDF | 23,984,738 | 23,984,761 | TGTGTTTGGTGTGCTTATTACAAC |
TDP | 23,984,712 | 23,984,737 | TCAGCCATGAACCCTCTGATCTACGC |
TDR | 23,984,630 | 23,984,651 | GTTCATAGTGGCTGAGCTGTTC |
PCR Primers
Primer | Sequence |
SU | CCATTATTTTGGACCATAGGAGC |
SD | GTTCAGCTCTGAGAAGAGAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 69 bp | + | + | - |
TDF | TDR | 132 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10749A-D5 | VGB6 | C57BL/6NTac | |
10749A-D6 | VGB6 | C57BL/6NTac | |
10749A-E2 | VGB6 | C57BL/6NTac | |
10749A-G3 | VGB6 | C57BL/6NTac | |
10749A-H10 | VGB6 | C57BL/6NTac | |
10749A-H11 | VGB6 | C57BL/6NTac | |