Gene | Hey2 |
Chromosome | 10 |
Deletion Start | 30,842,645 |
Deletion End | 30,833,691 |
Deletion Size | 8,955 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 30,842,626 | 30,842,645 | AAGCGCCCTTGTGAGGAAAC |
TUP | 30,842,601 | 30,842,624 | ACCTCCGAAAGCGACCTGGACGAG |
TUR | 30,842,560 | 30,842,580 | GCTCACCCAGGGTAATTGTTC |
TDF | 30,833,821 | 30,833,839 | GCCCACCCTTGTCGGTATC |
TDP | 30,833,800 | 30,833,820 | CGCAGCCTCCAGTCCTCAGCA |
TDR | 30,833,780 | 30,833,799 | TGTTTGTCCCAGTGCTTGTC |
PCR Primers
Primer | Sequence |
SU | CCTCTGCCAACGCCTCTC |
SD | CAGGAGAACTCAGTTATGGCG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 86 bp | + | + | - |
TDF | TDR | 60 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10788A-F11 | VGB6 | C57BL/6NTac | |
10788A-H7 | VGB6 | C57BL/6NTac | |