Gene | Eid1 |
Chromosome | 2 |
Deletion Start | 125,673,177 |
Deletion End | 125,673,671 |
Deletion Size | 495 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 125,673,218 | 125,673,238 | GCTGTACGAAGAAAGCAACGA |
TUP | 125,673,240 | 125,673,260 | TTGCAGATGGACGTGCTGCCC |
TUR | 125,673,262 | 125,673,280 | ACCTCCATATAGCCCTCGC |
TDF | 125,673,535 | 125,673,552 | TGGATGGCGGCTTTCAGG |
TDP | 125,673,555 | 125,673,579 | CGGTGTGAGAAGAGCCCTTTCGACC |
TDR | 125,673,643 | 125,673,667 | TCTCGATCAATGATCTCATCACAAC |
PCR Primers
Primer | Sequence |
SU | GTCACCAGCGGAAGCATCG |
SD | TGTGAGACCAAAGAGGAACG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 511 bp | - | + | + |
TUF | TUR | 63 bp | + | + | - |
TDF | TDR | 133 bp | + | + | - |
NeoFwd | SD | 320 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10853A-A7 | VGB6 | C57BL/6NTac | |
10853A-F7 | VGB6 | C57BL/6NTac | |
10853C-A11 | VGB6 | C57BL/6NTac | |
10853C-B5 | VGB6 | C57BL/6NTac | |
10853C-B12 | VGB6 | C57BL/6NTac | |
10853C-B6 | VGB6 | C57BL/6NTac | |
10853C-D8 | VGB6 | C57BL/6NTac | |