Gene | Nsun7 |
Chromosome | 5 |
Deletion Start | 66,297,927 |
Deletion End | 66,260,932 |
Deletion Size | 36,996 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 5
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 66,261,541 | 66,261,562 | GGAGCCGACATGGTTGTATAGG |
TUP | 66,261,567 | 66,261,588 | TACTCCCAGCGGCTGAGCCTTG |
TUR | 66,261,597 | 66,261,616 | CCCATCCTGGCTTGGAACTC |
TDF | 66,297,729 | 66,297,751 | CCTCTAGTGGCATGTGTTTCCTG |
TDP | 66,297,753 | 66,297,775 | CACGTGACCCTTGGGCGTCTCCT |
TDR | 66,297,790 | 66,297,814 | GGGCAAAGAGAAGACGAATTTAGTG |
PCR Primers
Primer | Sequence |
SU | AGTATGGGATGTTCCGATGG |
SD | TCGCTGTGTTGTGTTGTCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 76 bp | + | + | - |
TDF | TDR | 86 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10861A-C8 | VGB6 | C57BL/6NTac | |
10861A-E9 | VGB6 | C57BL/6NTac | |
10861A-E1 | VGB6 | C57BL/6NTac | |