Gene | Bex4 |
Chromosome | X |
Deletion Start | 136,139,863 |
Deletion End | 136,140,622 |
Deletion Size | 760 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 136,140,034 | 136,140,054 | AACTTTCTCTGGGCCATACCA |
TUP | | | AGGCATGTTGATCGCA |
TUR | 136,140,116 | 136,140,139 | CCGTAGTCTTTCTCTTGACTTCTG |
TDF | 136,140,449 | 136,140,473 | GCTCAGTCATCTTCTACTTCAGTTC |
TDP | 136,140,481 | 136,140,508 | TCCTTCATAGTGTCTTTCCTCTCCCAGC |
TDR | 136,140,514 | 136,140,536 | GGATGTGAAGAAAAGCAGTGTCC |
PCR Primers
Primer | Sequence |
SU | TCTGAGAAGCAGAAGCTTCG |
SD | TATGAGACTGGATAGGTTGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
10925A-D11 | VGB6 | C57BL/6NTac | |
10925A-F2 | VGB6 | C57BL/6NTac | |