Gene | Kcnk7 |
Chromosome | 19 |
Deletion Start | 5,704,459 |
Deletion End | 5,707,021 |
Deletion Size | 2,563 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 5,705,339 | 5,705,356 | TTGGCTGGAGCAGGATGG |
TUP | 5,705,357 | 5,705,380 | AGCCTGCCTCTAGACCACATGGCC |
TUR | 5,705,396 | 5,705,420 | GCTGTGAGGTAAGAGTGTAGTGAAG |
TDF | 5,706,725 | 5,706,746 | GGCCATGTTGTTAGCAGTAGAG |
TDP | 5,706,750 | 5,706,772 | TTCTCAGAGCTGCCTCAGGTCCG |
TDR | 5,706,843 | 5,706,860 | GCTCAGAGCCAGCTCATC |
PCR Primers
Primer | Sequence |
SU | ACTTTGCGTACGTTCGTGTG |
SD | ACGCTCCATGCCTCCATGCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 394 bp | - | + | + |
TUF | TUR | 82 bp | + | + | - |
TDF | TDR | 136 bp | + | + | - |
NeoFwd | SD | 306 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11022A-A2 | VGB6 | C57BL/6NTac | |
11022A-A11 | VGB6 | C57BL/6NTac | |
11022A-B9 | VGB6 | C57BL/6NTac | |