Gene | Kcng4 |
Chromosome | 8 |
Deletion Start | 119,633,632 |
Deletion End | 119,625,632 |
Deletion Size | 8,001 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 119,632,805 | 119,632,826 | GCCTGAAGGCATGTGAAATCTC |
TUP | 119,632,781 | 119,632,802 | TCCGGGAGACAAGCTGCTCCTA |
TUR | 119,632,743 | 119,632,765 | CCAGCCAGTAACACTAGGGAAAG |
TDF | 119,626,138 | 119,626,157 | GGGCACTACGCATCCTCTAC |
TDP | 119,626,116 | 119,626,136 | TAATGCGCCTGGCTCGCCACT |
TDR | 119,626,046 | 119,626,068 | AAGAGCATCAGGAGACCAAACTC |
PCR Primers
Primer | Sequence |
SU | GCAGAACCTCCTTAGTGTAG |
SD | GCAGACTCCGTATTTGGCTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 396 bp | - | + | + |
TUF | TUR | 84 bp | + | + | - |
TDF | TDR | 112 bp | + | + | - |
NeoFwd | SD | 421 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11043A-A8 | VGB6 | C57BL/6NTac | |
11043A-F4 | VGB6 | C57BL/6NTac | |
11043A-F7 | VGB6 | C57BL/6NTac | |
11043A-F10 | VGB6 | C57BL/6NTac | |
11043A-F12 | VGB6 | C57BL/6NTac | |