Gene | 1700012A03Rik |
Chromosome | 6 |
Deletion Start | 32,051,618 |
Deletion End | 32,058,780 |
Deletion Size | 7,163 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 32,052,109 | 32,052,129 | CCTCCAGTGTGGCACAGTTAG |
TUP | 32,052,130 | 32,052,154 | CCTCAGCAGCAAGGAAATGGAAGCA |
TUR | 32,052,155 | 32,052,176 | TGGCACCAAGGATGGTTTATTC |
TDF | 32,057,997 | 32,058,017 | TTCCTTCAGGTGGGACTTCAG |
TDP | 32,058,020 | 32,058,046 | TGTGGGCTGGGAAGTTATCCTACCTGT |
TDR | 32,058,060 | 32,058,081 | CCAGGACATTGTCTGGTGATTC |
PCR Primers
Primer | Sequence |
SU | TGGCTGTGGAGCCAGGAAG |
SD | ATTGTGGGAAGACATCCAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 292 bp | - | + | + |
TUF | TUR | 68 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | 338 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11076C-E3 | VGB6 | C57BL/6NTac | |
11076C-F11 | VGB6 | C57BL/6NTac | |