11121   Rpp25     Status: ES cell colonies screened / QC positives

GeneRpp25
Chromosome9
Deletion Start57,504,221
Deletion End57,504,837
Deletion Size617
Genome Build38
MGI IDMGI:2143151
NCBI Gene ID102614
BAC ID62D13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF57,504,30257,504,321CCCGAACTCTGGCCCTTTTG
TUP57,504,32557,504,349ATCTGGCACCCGGTGCTGTACACAT
TUR57,504,36857,504,388GCCAGTAGGTTGCGGATCTTG
TDF57,504,63557,504,655GAGCCTCGCCATCCTACTTTC
TDP57,504,67057,504,694ATCCACGACAACTTGGCTACCAGCC
TDR57,504,70257,504,721GACGAAGGACCAGGACTGAG

PCR Primers

PrimerSequence
SUCTGGGACAAGTCACGCAGAG
SDTGGCTTCTGGTAACATGTCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev415 bp-++
TUFTUR87 bp++-
TDFTDR87 bp++-
NeoFwdSD312 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11121B-H8VGB6C57BL/6NTac
11121B-D4VGB6C57BL/6NTac
11121B-H4VGB6C57BL/6NTac
11121B-A8VGB6C57BL/6NTac