Gene | Klhdc7a |
Chromosome | 4 |
Deletion Start | 139,967,631 |
Deletion End | 139,965,306 |
Deletion Size | 2,326 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 139,967,230 | 139,967,250 | CAGTGTCCAGACTCTCAGCAG |
TUP | 139,967,209 | 139,967,228 | TGCCTCCTCCCTGTGGTGGC |
TUR | 139,967,172 | 139,967,193 | GGTTGGGCTTACCTCTAACATC |
TDF | 139,965,537 | 139,965,555 | AGCACCCGGCTCTGGTATG |
TDP | 139,965,507 | 139,965,532 | TGCCACATACCGCTTACCTTACCCTG |
TDR | 139,965,485 | 139,965,503 | ACAACGGCGCACTGGAAGG |
PCR Primers
Primer | Sequence |
SU | GCAGGTGACTGATCTGAAGC |
SD | GTTGTGAGATTCCAGCTGTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 394 bp | - | + | + |
TUF | TUR | 79 bp | + | + | - |
TDF | TDR | 71 bp | + | + | - |
NeoFwd | SD | 313 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11217A-E2 | VGB6 | C57BL/6NTac | |
11217A-F1 | VGB6 | C57BL/6NTac | |
11217A-F4 | VGB6 | C57BL/6NTac | |
11217A-E7 | VGB6 | C57BL/6NTac | |