Gene | Prss23 |
Chromosome | 7 |
Deletion Start | 89,510,856 |
Deletion End | 89,509,654 |
Deletion Size | 1,203 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 89,510,722 | 89,510,741 | TGCCTCAGTCTACCCTCAAC |
TUP | 89,510,697 | 89,510,720 | TAGCTAAGGCAGACTTCGACGCCA |
TUR | 89,510,636 | 89,510,655 | GGCAGTGGTGTTCCCTTGTG |
TDF | 89,510,170 | 89,510,188 | ACGCACCCATGTGCCCAAG |
TDP | 89,510,142 | 89,510,166 | TGGATCAAGGGCAATGCCAATGACA |
TDR | 89,510,112 | 89,510,133 | CCAGCAGGGCGTAGTCATAATC |
PCR Primers
Primer | Sequence |
SU | CCCTGTAATGTCCCATGGTC |
SD | AAATTGCCTATTGAAGACTTTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 77 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11263A-B10 | VGB6 | C57BL/6NTac | |
11263A-C7 | VGB6 | C57BL/6NTac | |
11263A-H8 | VGB6 | C57BL/6NTac | |
11263A-D10 | VGB6 | C57BL/6NTac | |
11263A-E9 | VGB6 | C57BL/6NTac | |