Gene | Wfdc15a |
Chromosome | 2 |
Deletion Start | 164,200,033 |
Deletion End | 164,199,586 |
Deletion Size | 448 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 164,199,995 | 164,200,019 | CCTACTGTTCACAACAACCATCCTC |
TUP | 164,199,973 | 164,199,994 | CTTTGCCTCAGCATGGCGCAGC |
TUR | 164,199,936 | 164,199,959 | GACCATTCTGCATCACCTCCTTTC |
TDF | 164,199,773 | 164,199,793 | CCGGAGTTTCTTCTTGACTGC |
TDP | 164,199,746 | 164,199,772 | CCGTTTGTCCTGTTACCCGTATGCAGC |
TDR | 164,199,725 | 164,199,744 | GCCCTTGCACCCTTTATCAC |
PCR Primers
Primer | Sequence |
SU | CAGGATAAGTGTGGGTTGGC |
SD | TTCAACCATGAATTATGATCTCG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 84 bp | + | + | - |
TDF | TDR | 69 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11270A-A1 | VGB6 | C57BL/6NTac | |
11270A-G11 | VGB6 | C57BL/6NTac | |
11270A-B7 | VGB6 | C57BL/6NTac | |
11270A-C4 | VGB6 | C57BL/6NTac | |
11270A-E4 | VGB6 | C57BL/6NTac | |