Gene | Foxd4 |
Chromosome | 19 |
Deletion Start | 24,900,831 |
Deletion End | 24,899,446 |
Deletion Size | 1,386 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 24,900,795 | 24,900,814 | GCACCTTCGTTCCACTCCAC |
TUP | 24,900,767 | 24,900,792 | CCCAGTCCTCTAAGTTCCGACCAGGA |
TUR | 24,900,716 | 24,900,738 | TCCGTCTGATCTCCATCTTCCTC |
TDF | 24,899,656 | 24,899,674 | GCAGCAAGAACAGCATCAC |
TDP | 24,899,635 | 24,899,655 | TGTGCCATTAGCTGCGCTCCC |
TDR | 24,899,533 | 24,899,551 | AAGAGCGGCCAGGGTTGTC |
PCR Primers
Primer | Sequence |
SU | CGAGGAACGGCAAAGAAGG |
SD | AGCGGACAAGACCAAGCAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 347 bp | - | + | + |
TUF | TUR | 99 bp | + | + | - |
TDF | TDR | 142 bp | + | + | - |
NeoFwd | SD | 280 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11352A-B8 | VGB6 | C57BL/6NTac | |
11352A-C5 | VGB6 | C57BL/6NTac | |
11352A-C9 | VGB6 | C57BL/6NTac | |