Gene | Taar2 |
Chromosome | 10 |
Deletion Start | 23,938,575 |
Deletion End | 23,941,643 |
Deletion Size | 3,069 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 23,939,452 | 23,939,473 | TCAACATGGATGGAGGGACTTC |
TUP | 23,939,475 | 23,939,496 | TGGGCCCTAGTTGATGGCCCTG |
TUR | 23,939,515 | 23,939,534 | TCTGAACCCACATGGCACTG |
TDF | 23,940,788 | 23,940,809 | CACCGACTTCCTTCTCGGATTC |
TDP | 23,940,815 | 23,940,844 | CATGCCATATAGTATGGTCAGGTCAGTGGA |
TDR | 23,940,848 | 23,940,869 | CGTAAGTCCGAAATACCAGCAG |
PCR Primers
Primer | Sequence |
SU | ATCAGAATTGAGAGCCTCCG |
SD | AAATCATCTCTCTCACTTCCACC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 82 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11384A-A5 | VGB6 | C57BL/6NTac | |
11384A-E5 | VGB6 | C57BL/6NTac | |
11384A-G12 | VGB6 | C57BL/6NTac | |
11384A-F6 | VGB6 | C57BL/6NTac | |