11391   Gcc1     Status: ES cell colonies screened / QC one positive

GeneGcc1
Chromosome6
Deletion Start28,421,313
Deletion End28,417,957
Deletion Size3,357
Genome Build38
MGI IDMGI:1921625
NCBI Gene ID74375
BAC ID39E1
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF28,420,64228,420,663GCAAGAGCAGATAGCAGAAACC
TUP28,420,61628,420,639AGCCCGCCTCATTACACAGCAGCA
TUR28,420,56728,420,585AAGCTCGCGCAGCATCAAG
TDF28,418,41128,418,432CCGACACAGCCTCCTCAGATAG
TDP28,418,38928,418,410CTTGACCCAGGCCCTGCAGCTT
TDR28,418,34828,418,371TGCTCAGCATAAAGAAAGAAGGTG

PCR Primers

PrimerSequence
SUTGCTAGGTCAGCGTCACTC
SDCACTACGAGATGCTGTCTCA
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev349 bp-++
TUFTUR97 bp++-
TDFTDR85 bp++-
NeoFwdSD293 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11391A-B11VGB6C57BL/6NTac