Gene | Acvr2b |
Chromosome | 9 |
Deletion Start | 119,427,487 |
Deletion End | 119,433,682 |
Deletion Size | 6,196 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 119,428,285 | 119,428,303 | TCGTCCTGCTGGCCTTCTG |
TUP | 119,428,306 | 119,428,332 | TGTATCGTCATCGGAAGCCTCCCTACG |
TUR | 119,428,355 | 119,428,373 | CCAACGCTGGCACTGTCTC |
TDF | 119,433,283 | 119,433,301 | GCGTGACCATCGAGGAGTG |
TDP | 119,433,307 | 119,433,331 | ACCATGATGCAGAGGCTCGCCTTTC |
TDR | 119,433,342 | 119,433,363 | TCAGGGATACCCGCTCTTCTAC |
PCR Primers
Primer | Sequence |
SU | GAAAGAGCGCAGGAAGGTC |
SD | CCGTGTAACAGTCTTCAAAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 89 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11407A-B9 | VGB6 | C57BL/6NTac | |
11407A-D5 | VGB6 | C57BL/6NTac | |
11407A-G6 | VGB6 | C57BL/6NTac | |