11412   Trem3     Status: ES cell colonies screened / QC positives

GeneTrem3
Chromosome17
Deletion Start48,247,852
Deletion End48,258,547
Deletion Size10,895
Genome Build38
MGI IDMGI:1930003
NCBI Gene ID58218
BAC ID
BAC Library
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF48,248,55948,248,578TGGGCCACCAGACATACAAC
TUP48,248,58848,248,616TAGAGAACTGGGAATAGTGGGACATGCCT
TUR48,248,61748,248,636CTCCCGACTGCTAGGATGAC
TDF48,257,75948,257,777GCAAGGCAGGTAGCAGGTC
TDP48,257,77848,257,801CAACCACAGAGCCCTGAAGGCAGG
TDR48,257,83248,257,855GCAAGTGTGAGCACTCCAAGAATG

PCR Primers

PrimerSequence
SUGATTGTGGCATCAAAGGAGG
SDGAGATAGGTTACATCATATAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR97 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11412A-E5VGB6C57BL/6NTac
11412B-B12VGB6C57BL/6NTac
11412B-H2VGB6C57BL/6NTac