Gene | Rab9b |
Chromosome | X |
Deletion Start | 136,861,646 |
Deletion End | 136,860,991 |
Deletion Size | 656 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 136,861,422 | 136,861,444 | TCAAGAGCCTTAGAACACCATTC |
TUP | 136,861,391 | 136,861,413 | AGCCGACTGCTGCCTGCTAACCT |
TUR | 136,861,363 | 136,861,382 | TCAAAGCTCTGCCGGTCATC |
TDF | 136,861,232 | 136,861,251 | AACGACTGAGGAGGCACAAG |
TDP | 136,861,204 | 136,861,231 | CCTGGTGCATGGAGAATGGAAATTACCC |
TDR | 136,861,147 | 136,861,167 | GCTTCTTCAAAGGCCACTGTC |
PCR Primers
Primer | Sequence |
SU | TCATGGCATTCAGCCTTTCC |
SD | AATACACTTGGCTCAATAAAGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 396 bp | - | + | + |
TUF | TUR | 82 bp | + | + | - |
TDF | TDR | 105 bp | + | + | - |
NeoFwd | SD | 407 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11442A-F3 | VGB6 | C57BL/6NTac | |
11442A-G12 | VGB6 | C57BL/6NTac | |
11442A-H1 | VGB6 | C57BL/6NTac | |
11442A-H7 | VGB6 | C57BL/6NTac | |
11442A-H12 | VGB6 | C57BL/6NTac | |