11560   Sycp3     Status: ES cell colonies screened / QC positives

GeneSycp3
Chromosome10
Deletion Start88,459,669
Deletion End88,472,959
Deletion Size13,291
Genome Build38
MGI IDMGI:109542
NCBI Gene ID20962
BAC ID235A20
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 10

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF88,460,09088,460,109AGGGCCGAGGGAACTAGGAG
TUP88,460,11088,460,134TCAAGGGCTAAAGCAGTCGGGAAGC
TUR88,460,18888,460,207CCTCAGCCTGACCCTTCTTC
TDF88,472,03988,472,062ACTAGGGCAGAGTTCAATCTATGG
TDP88,472,06488,472,083ACCCATATGCTAGAAGAAGA
TDR88,472,08488,472,105ACAACTCGTGGGTACTAGGTTC

PCR Primers

PrimerSequence
SUGAGGATCCATGAGCAAAGATG
SDCTATACTTGGAACCTTGTACC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev451 bp-++
TUFTUR118 bp++-
TDFTDR67 bp++-
NeoFwdSD434 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11560A-C8VGB6C57BL/6NTac
11560A-H1VGB6C57BL/6NTac
11560A-D10VGB6C57BL/6NTac
11560A-D8VGB6C57BL/6NTac
11560A-E5VGB6C57BL/6NTac