11571   Nat1     Status: ES cell colonies screened / QC positives

GeneNat1
Chromosome8
Deletion Start67,490,977
Deletion End67,491,923
Deletion Size947
Genome Build38
MGI IDMGI:97279
NCBI Gene ID17960
BAC ID386F10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 8

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF67,491,33367,491,352TGTGGATTCCGCCTATGGAG
TUP67,491,35567,491,379TCCTACCAGATGTGGGAGCCTCTGG
TUR67,491,39367,491,412GCACCTGAGGCTGATCCTTC
TDF67,491,60767,491,629TCGCCAGCATCTGTGTTTGTAAG
TDP67,491,63267,491,658CATCGTTCTGTTCCTTGCAGACCTCGG
TDR67,491,66467,491,685TGGAGCCCACTAAACAGTGAAC

PCR Primers

PrimerSequence
SUTCGACATGGCCACTATGTTC
SDTGGTTTCTTGTAAACCATGGAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR80 bp++-
TDFTDR79 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11571A-A3VGB6C57BL/6NTac
11571A-D5VGB6C57BL/6NTac
11571A-H3VGB6C57BL/6NTac
11571A-F10VGB6C57BL/6NTac
11571A-F2VGB6C57BL/6NTac
11571A-H9VGB6C57BL/6NTac