Gene | Slc25a5 |
Chromosome | X |
Deletion Start | 36,795,734 |
Deletion End | 36,798,600 |
Deletion Size | 2,867 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 36,796,072 | 36,796,092 | CGGCACAGAGAACTAGGATGG |
TUP | 36,796,095 | 36,796,117 | TTGCCCGAGAGGCTCTGTCTAGC |
TUR | 36,796,147 | 36,796,164 | TTTCCAGCGCCTGCTTTC |
TDF | 36,797,984 | 36,798,005 | CAGCTCGGTGGTAGAGCATTAG |
TDP | 36,798,006 | 36,798,035 | CCCACCGTACTCAAGGCCCTATATTCAATC |
TDR | 36,798,048 | 36,798,070 | CCCTTCAGAGCCTACAGCATTTC |
PCR Primers
Primer | Sequence |
SU | TCTTACTCTGGCCTGATCAG |
SD | AACAAACAACGAACAAAACTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 415 bp | - | + | + |
TUF | TUR | 93 bp | + | + | - |
TDF | TDR | 87 bp | + | + | - |
NeoFwd | SD | 306 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11616A-C7 | VGB6 | C57BL/6NTac | |
11616A-H6 | VGB6 | C57BL/6NTac | |