11648   Abcb9     Status: ES cell colonies screened / QC positives

GeneAbcb9
Chromosome5
Deletion Start124,090,173
Deletion End124,062,603
Deletion Size27,571
Genome Build38
MGI IDMGI:1861729
NCBI Gene ID56325
BAC ID415A9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF124,089,581124,089,601CGTAGCAGCTCTGGGTAAGTG
TUP124,089,554124,089,577CCTTGGGTCTGACCACACTGAGCC
TUR124,089,522124,089,541AGGCACCCTGCAAGTACATC
TDF124,063,085124,063,105TGGGCTGTCTGGAATAGAAAC
TDP124,063,061124,063,083CAGGACTTGAGCTGCCTTGGTCC
TDR124,063,030124,063,052GCTGACATTCAGTTCTTGGGTTG

PCR Primers

PrimerSequence
SUGAGTGTCTGGCTGGCTTCTG
SDCTCTCCCAGACATCCTCCAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev600 bp-++
TUFTUR80 bp++-
TDFTDR76 bp++-
NeoFwdSD387 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11648B-F7VGB6C57BL/6NTac
11648C-A3VGB6C57BL/6NTac
11648C-H4VGB6C57BL/6NTac