11653   Ctss     Status: Germline transmission achieved

GeneCtss
Chromosome3
Deletion Start95,526,903
Deletion End95,556,199
Deletion Size29,297
Genome Build38
MGI IDMGI:107341
NCBI Gene ID13040
BAC ID323F14
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 3

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF95,527,73895,527,759GGTTGAGCTGCTTGGTTGTTTG
TUP95,527,76595,527,788CTTTGGTGTTCACGCTCAGGCCAA
TUR95,527,83995,527,859TGTCCAGGCAACACAGAGAAG
TDF95,555,53195,555,550GCTGGGCCACACCTGTAATC
TDP95,555,55295,555,579CAGGCTTGGAAAGTCAAAGCTGGAGAAC
TDR95,555,58495,555,604ACGCAGTCTGGCTGCAAGTTC

PCR Primers

PrimerSequence
SUTTGTCCTGTTCTCTGCTGAG
SDAATGTTATCTAAGGACGACTTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev403 bp-++
TUFTUR122 bp++-
TDFTDR74 bp++-
NeoFwdSD352 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11653A-B12VGB6C57BL/6NTac
11653B-A5VGB6C57BL/6NTac
11653C-C9VGB6C57BL/6NTac
11653B-A2VGB6C57BL/6NTac