11661   Calu     Status: ES cell colonies screened / QC positives

GeneCalu
Chromosome6
Deletion Start29,356,460
Deletion End29,374,504
Deletion Size18,045
Genome Build38
MGI IDMGI:1097158
NCBI Gene ID12321
BAC ID307A8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF29,356,96029,356,979GCGGCACATACTGCTCTTTC
TUP29,356,98229,357,009AGGACCCAGATTCAATATCTAGCGCTCA
TUR29,357,01129,357,033CAGATGGATGGGTAACTCTTGAC
TDF29,374,36729,374,387TGGCCTCAATTCACTGTTCAC
TDP29,374,38829,374,413TCTGGTTTCAGGATGGCAAGCTCACC
TDR29,374,43829,374,459CCTGGCTGCCCACAAATAAATC

PCR Primers

PrimerSequence
SUTCGTAATTAGCCCAGAGTCG
SDGTAAACCTACAGACACAAGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev348 bp-++
TUFTUR74 bp++-
TDFTDR93 bp++-
NeoFwdSD309 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11661A-C4VGB6C57BL/6NTac
11661B-G1VGB6C57BL/6NTac
11661B-F3VGB6C57BL/6NTac
11661B-F10VGB6C57BL/6NTac
11661C-B6VGB6C57BL/6NTac