11691   Iscu     Status: ES cell colonies screened / QC positives

GeneIscu
Chromosome5
Deletion Start113,772,814
Deletion End113,777,925
Deletion Size5,112
Genome Build38
MGI IDMGI:1913633
NCBI Gene ID66383
BAC ID118E24
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF113,773,272113,773,293TGACAGGAGTCTTCTGAAGTCC
TUP113,773,306113,773,329CGCTCGGTCCAACCAAGGGAAACC
TUR113,773,375113,773,393GGCTAGGTGCTTGGCTGAG
TDF113,777,806113,777,829AGCTGTCTACCTTCCCATGCCTTC
TDP113,777,833113,777,854TGCTGGCAGAAGACGCCATCAA
TDR113,777,883113,777,905GGCTCCTCCTTCTTGGACTCTTG

PCR Primers

PrimerSequence
SUTCGAATCATAAACACGCCTG
SDCTGGCAATCTACCTCAGGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev353 bp-++
TUFTUR122 bp++-
TDFTDR100 bp++-
NeoFwdSD338 bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11691A-A12VGB6C57BL/6NTac
11691A-B10VGB6C57BL/6NTac
11691A-B11VGB6C57BL/6NTac
11691A-H8VGB6C57BL/6NTac