11703 Ccdc99 Status: ES cell colonies screened / QC no positives
Gene | Ccdc99 |
Chromosome | 11 |
Deletion Start | 34,830,877 |
Deletion End | 34,809,651 |
Deletion Size | 21,227 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 34,830,529 | 34,830,550 | TTGCTACATTTACTGCCTGGTG |
TUP | 34,830,505 | 34,830,528 | TGGTTCAATCCATGCTCTGCGTCA |
TUR | 34,830,464 | 34,830,485 | GGAGCACTCAGAGGTTTAGAAC |
TDF | 34,811,928 | 34,811,952 | AGAGATGAGAAGGTAGAGTGTCTGG |
TDP | 34,811,904 | 34,811,927 | AGCCCAGGCACCTGATACAGCAGG |
TDR | 34,811,874 | 34,811,894 | GATCAGGTCCACGTTTACCAC |
PCR Primers
Primer | Sequence |
SU | TGTGCTGTCACTGATAAGAG |
SD | CCATGTTCAAACTCCACATC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | 303 bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 79 bp | + | + | - |
NeoFwd | SD | 316 bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |