11760   Star     Status: ES cell colonies screened / QC positives

GeneStar
Chromosome8
Deletion Start25,808,572
Deletion End25,812,888
Deletion Size4,317
Genome Build38
MGI IDMGI:102760
NCBI Gene ID20845
BAC ID172M7
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 8

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF25,809,31725,809,338AGAGATGTGGCTGGAGTTTGAG
TUP25,809,33925,809,360TCCCTGCTGGGATCTGTGTCCC
TUR25,809,39425,809,413CTCTGGGAGAGGGACAGTTC
TDF25,812,74725,812,767TCCCAGTGCTCTTGTGTCTAC
TDP25,812,77625,812,802TGGCTGCCGAAGACAATCATCAACCAG
TDR25,812,82025,812,839GGTGGTTGGCGAACTCTATC

PCR Primers

PrimerSequence
SUTACCTGCAGAGTCTGGTCC
SDGTCAGCATATACAAGCCTAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR97 bp++-
TDFTDR93 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11760A-H10VGB6C57BL/6NTac
11760C-G4VGB6C57BL/6NTac
11760C-F11VGB6C57BL/6NTac
11760C-B12VGB6C57BL/6NTac