11790 Sf3b4 Status: ES cell colonies screened / QC no positives
Gene | Sf3b4 |
Chromosome | 3 |
Deletion Start | 96,172,577 |
Deletion End | 96,177,215 |
Deletion Size | 4,639 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 96,172,789 | 96,172,808 | GCTCCCTCCACCAAGAAGAC |
TUP | 96,172,818 | 96,172,837 | CCGGGAGTACCGGACCAGCA |
TUR | 96,172,870 | 96,172,889 | TTCCCTCTGCCACCATCATC |
TDF | 96,176,839 | 96,176,860 | TGCCTTTGTGCAGCTTTCTTTG |
TDP | 96,176,864 | 96,176,884 | CTCGCCCTGTCTGGTGCCCTT |
TDR | 96,176,909 | 96,176,933 | TAATGTGGAGATGAGTAGGGATGAG |
PCR Primers
Primer | Sequence |
SU | CAACTCTGCGTCACAGAACG |
SD | GACACTTCCCAGCCAAATTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 101 bp | + | + | - |
TDF | TDR | 95 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |