11798   Dnajb6     Status: ES cell colonies screened / QC positives

GeneDnajb6
Chromosome5
Deletion Start29,748,374
Deletion End29,785,216
Deletion Size36,843
Genome Build38
MGI IDMGI:1344381
NCBI Gene ID23950
BAC ID365O5
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF29,748,73429,748,757CATGATAGGCAGACACCAGTTTAC
TUP29,748,75829,748,781TGCCCAACACAGACCTAAAGTGGC
TUR29,748,84329,748,867CACCAACTAGATAGAATGCCCAATG
TDF29,784,99129,785,011GTTGCTGGTGTGCAGTGTTTC
TDP29,785,02029,785,047TGTTTCCTTAGGGCTCAAAGAAGGTGGC
TDR29,785,05029,785,069TCTGCTTCTGCTTCTTCCTC

PCR Primers

PrimerSequence
SUGCACCTGATCTCTGCCTCAG
SDAAACTGCGCACTGTACCACC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR134 bp++-
TDFTDR79 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11798A-A5VGB6C57BL/6NTac
11798A-D6VGB6C57BL/6NTac
11798A-E1VGB6C57BL/6NTac
11798A-G7VGB6C57BL/6NTac