11828   Alas2     Status: ES cell colonies screened / QC positives

GeneAlas2
ChromosomeX
Deletion Start150,552,167
Deletion End150,570,551
Deletion Size18,385
Genome Build38
MGI IDMGI:87990
NCBI Gene ID11656
BAC ID343A8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome X

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF150,552,289150,552,311CACTCAAGGACCAACCTGTTCTC
TUP150,552,315150,552,340TCCATCTTAAGGCAACCAAGGCTGGA
TUR150,552,349150,552,371TCCCATTTGCCAATAACCTCTTC
TDF150,570,391150,570,411GCAACTTCTGTCATCGTCCTG
TDP150,570,416150,570,443CTTTGAACTTATGAGCGAGTGGGAGCGA
TDR150,570,445150,570,466GGTCCCATGTTCCCAAAGTAGG

PCR Primers

PrimerSequence
SUGGCATCTGTCCACATAAGTG
SDTTTGTACAGCTTCCAGTACAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR83 bp++-
TDFTDR76 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11828B-A2VGB6C57BL/6NTac
11828B-E2VGB6C57BL/6NTac