11909   Trh     Status: ES cell colonies screened / QC positives

GeneTrh
Chromosome6
Deletion Start92,244,153
Deletion End92,242,834
Deletion Size1,320
Genome Build38
MGI IDMGI:98823
NCBI Gene ID22044
BAC ID437L4
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF92,243,82892,243,850GGCTTTGATCTTCGTGCTAACTG
TUP92,243,79892,243,822CCCAAATCCTGCGCCTTGCTGGAAG
TUR92,243,75792,243,775GCCTGGAAGGTCAGGAGTC
TDF92,243,16692,243,185GCAAGCAAGGGTTCCTGATG
TDP92,243,14592,243,165ACGGGACCAGGCTCTCCCACA
TDR92,243,06292,243,084GCTTCAACGTCTTCCTCCTTCTC

PCR Primers

PrimerSequence
SUTGTCAGATGCAGCGCTGAC
SDGTCTTGGCCAGTGTGGAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR94 bp++-
TDFTDR124 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11909A-D8VGB6C57BL/6NTac
11909A-D12VGB6C57BL/6NTac
11909A-E4VGB6C57BL/6NTac
11909A-G5VGB6C57BL/6NTac
11909A-E12VGB6C57BL/6NTac