Gene | Uqcrh |
Chromosome | 4 |
Deletion Start | 116,074,860 |
Deletion End | 116,067,033 |
Deletion Size | 7,828 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 4
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 116,074,105 | 116,074,127 | GCAAGACAATACAACTGGGACTC |
TUP | 116,074,079 | 116,074,104 | CAATGCAGACGTCCAGGCTTGAGAGC |
TUR | 116,074,035 | 116,074,056 | TGCACAGGAAATGGAAGCAAAG |
TDF | 116,067,814 | 116,067,834 | TAGGGCCTGCGTATGGATAAC |
TDP | 116,067,782 | 116,067,809 | TGAAGAATGAGGGTCAAGACAGGAGCTC |
TDR | 116,067,761 | 116,067,779 | TCCTTCCTGGCCTGAACAG |
PCR Primers
Primer | Sequence |
SU | AAGAAGTGACCGAAAGGATG |
SD | AAGAGCAAGTTTGCAGATCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 93 bp | + | + | - |
TDF | TDR | 74 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11922A-A12 | VGB6 | C57BL/6NTac | |
11922A-C9 | VGB6 | C57BL/6NTac | |
11922A-F10 | VGB6 | C57BL/6NTac | |
11922A-F7 | VGB6 | C57BL/6NTac | |
11922A-E3 | VGB6 | C57BL/6NTac | |
11922A-H6 | VGB6 | C57BL/6NTac | |